| # | Title | Journal | Year | Citations |
|---|
| 1 | Fungal endophytes from higher plants: a prolific source of phytochemicals and other bioactive natural products | Fungal Diversity | 2010 | 514 |
| 2 | Families of Dothideomycetes | Fungal Diversity | 2013 | 509 |
| 3 | The Faces of Fungi database: fungal names linked with morphology, phylogeny and human impacts | Fungal Diversity | 2015 | 471 |
| 4 | The amazing potential of fungi: 50 ways we can exploit fungi industrially | Fungal Diversity | 2019 | 459 |
| 5 | High-level classification of the Fungi and a tool for evolutionary ecological analyses | Fungal Diversity | 2018 | 450 |
| 6 | The sooty moulds | Fungal Diversity | 2014 | 417 |
| 7 | FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles | Fungal Diversity | 2020 | 387 |
| 8 | Fungal diversity notes 111–252—taxonomic and phylogenetic contributions to fungal taxa | Fungal Diversity | 2015 | 375 |
| 9 | The genus Phomopsis: biology, applications, species concepts and names of common phytopathogens | Fungal Diversity | 2011 | 331 |
| 10 | Fungal diversity notes 367–490: taxonomic and phylogenetic contributions to fungal taxa | Fungal Diversity | 2016 | 314 |
| 11 | Fungal diversity notes 1–110: taxonomic and phylogenetic contributions to fungal species | Fungal Diversity | 2015 | 304 |
| 12 | Hymenochaetaceae (Basidiomycota) in China | Fungal Diversity | 2010 | 303 |
| 13 | Pleosporales | Fungal Diversity | 2012 | 282 |
| 14 | Towards a natural classification and backbone tree for Sordariomycetes | Fungal Diversity | 2015 | 273 |
| 15 | Classification of marine Ascomycota, Basidiomycota, Blastocladiomycota and Chytridiomycota | Fungal Diversity | 2015 | 268 |
| 16 | Families of Sordariomycetes | Fungal Diversity | 2016 | 256 |
| 17 | Notes, outline and divergence times of Basidiomycota | Fungal Diversity | 2019 | 256 |
| 18 | Endophytic mediation of reactive oxygen species and antioxidant activity in plants: a review | Fungal Diversity | 2012 | 251 |
| 19 | The exploitation of epichloae endophytes for agricultural benefit | Fungal Diversity | 2013 | 246 |
| 20 | One stop shop: backbones trees for important phytopathogenic genera: I (2014) | Fungal Diversity | 2014 | 241 |
| 21 | Fungal diversity notes 253–366: taxonomic and phylogenetic contributions to fungal taxa | Fungal Diversity | 2016 | 239 |
| 22 | Outline of Ascomycota: 2017 | Fungal Diversity | 2018 | 232 |
| 23 | Endophytes and their role in phytoremediation | Fungal Diversity | 2012 | 226 |
| 24 | Colletotrichum gloeosporioides is not a common pathogen on tropical fruits | Fungal Diversity | 2010 | 225 |
| 25 | Insights into the genus Diaporthe: phylogenetic species delimitation in the D. eres species complex | Fungal Diversity | 2014 | 221 |
| 26 | Defensive mutualism between plants and endophytic fungi? | Fungal Diversity | 2010 | 216 |
| 27 | A phylogenetic and taxonomic re-evaluation of the Bipolaris - Cochliobolus - Curvularia Complex | Fungal Diversity | 2012 | 216 |
| 28 | Naming and outline of Dothideomycetes–2014 including proposals for the protection or suppression of generic names | Fungal Diversity | 2014 | 216 |
| 29 | Notes for genera: Ascomycota | Fungal Diversity | 2017 | 213 |
| 30 | A multi-locus backbone tree for Pestalotiopsis, with a polyphasic characterization of 14 new species | Fungal Diversity | 2012 | 211 |
| 31 | Fungal diversity notes 929–1035: taxonomic and phylogenetic contributions on genera and species of fungi | Fungal Diversity | 2019 | 203 |
| 32 | Pestalotiopsis—morphology, phylogeny, biochemistry and diversity | Fungal Diversity | 2011 | 198 |
| 33 | Species clarification of the prize medicinal Ganoderma mushroom “Lingzhi” | Fungal Diversity | 2012 | 198 |
| 34 | Towards a natural classification of Botryosphaeriales | Fungal Diversity | 2012 | 198 |
| 35 | A multi-locus phylogenetic evaluation of Diaporthe (Phomopsis) | Fungal Diversity | 2012 | 189 |
| 36 | Getting to the bottom of Taxol biosynthesis by fungi | Fungal Diversity | 2013 | 186 |
| 37 | What if esca disease of grapevine were not a fungal disease? | Fungal Diversity | 2012 | 185 |
| 38 | Molecular phylogenetic analyses redefine seven major clades and reveal 22 new generic clades in the fungal family Boletaceae | Fungal Diversity | 2014 | 183 |
| 39 | Resource diversity of Chinese macrofungi: edible, medicinal and poisonous species | Fungal Diversity | 2019 | 183 |
| 40 | Bioactive metabolites from macrofungi: ethnopharmacology, biological activities and chemistry | Fungal Diversity | 2013 | 182 |
| 41 | Medicinal mushrooms in prevention and control of diabetes mellitus | Fungal Diversity | 2012 | 181 |
| 42 | Fungal diversity notes 491–602: taxonomic and phylogenetic contributions to fungal taxa | Fungal Diversity | 2017 | 180 |
| 43 | Community composition of endophytic fungi in Acer truncatum and their role in decomposition | Fungal Diversity | 2011 | 178 |
| 44 | Goodbye morphology? A paradigm shift in the delimitation of species in lichenized fungi | Fungal Diversity | 2011 | 178 |
| 45 | Endophytes versus biotrophic and necrotrophic pathogens—are fungal lifestyles evolutionarily stable traits? | Fungal Diversity | 2013 | 175 |
| 46 | Medicinal mushrooms in supportive cancer therapies: an approach to anti-cancer effects and putative mechanisms of action | Fungal Diversity | 2012 | 173 |
| 47 | Biogeography and phylogeography of Fusarium: a review | Fungal Diversity | 2010 | 170 |
| 48 | Fungal diversity notes 709–839: taxonomic and phylogenetic contributions to fungal taxa with an emphasis on fungi on Rosaceae | Fungal Diversity | 2018 | 169 |
| 49 | Fungal diversity notes 603–708: taxonomic and phylogenetic notes on genera and species | Fungal Diversity | 2017 | 165 |
| 50 | The endophytic mycota associated with Vitis vinifera in central Spain | Fungal Diversity | 2011 | 164 |
