# | Title | Journal | Year | Citations |
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1 | Diversity Arrays Technology (DArT) and next-generation sequencing combined: genome-wide, high throughput, highly informative genotyping for molecular breeding of Eucalyptus | BMC Proceedings | 2011 | 335 |
2 | Genomic selection using regularized linear regression models: ridge regression, lasso, elastic net and their extensions | BMC Proceedings | 2012 | 245 |
3 | A comparison of random forests, boosting and support vector machines for genomic selection | BMC Proceedings | 2011 | 169 |
4 | Genetic Analysis Workshop 17 mini-exome simulation | BMC Proceedings | 2011 | 153 |
5 | Biological pathway analysis by ArrayUnlock and Ingenuity Pathway Analysis | BMC Proceedings | 2009 | 135 |
6 | Globaltest and GOEAST: two different approaches for Gene Ontology analysis | BMC Proceedings | 2009 | 122 |
7 | The effect of minor allele frequency on the likelihood of obtaining false positives | BMC Proceedings | 2009 | 121 |
8 | Biofilm formation and antibiotic resistance of Klebsiella pneumoniae isolated from clinical samples in a tertiary care hospital, Klaten, Indonesia | BMC Proceedings | 2019 | 108 |
9 | A new approach to mentoring for research careers: the National Research Mentoring Network | BMC Proceedings | 2017 | 105 |
10 | A synopsis of eukaryotic Nα-terminal acetyltransferases: nomenclature, subunits and substrates | BMC Proceedings | 2009 | 101 |
11 | Genetics Analysis Workshop 16 Problem 2: the Framingham Heart Study data | BMC Proceedings | 2009 | 80 |
12 | Effects of dietary plant-derived phytonutrients on the genome-wide profiles and coccidiosis resistance in the broiler chickens | BMC Proceedings | 2011 | 74 |
13 | Data for Genetic Analysis Workshop 18: human whole genome sequence, blood pressure, and simulated phenotypes in extended pedigrees | BMC Proceedings | 2014 | 65 |
14 | miRTarVis: an interactive visual analysis tool for microRNA-mRNA expression profile data | BMC Proceedings | 2015 | 64 |
15 | Comparison of methods for correcting population stratification in a genome-wide association study of rheumatoid arthritis: principal-component analysis versus multidimensional scaling | BMC Proceedings | 2009 | 60 |
16 | Elastic-net regularization approaches for genome-wide association studies of rheumatoid arthritis | BMC Proceedings | 2009 | 60 |
17 | Comparison of analyses of the QTLMAS XII common dataset. I: Genomic selection | BMC Proceedings | 2009 | 57 |
18 | A review of COFRADIC techniques targeting protein N-terminal acetylation | BMC Proceedings | 2009 | 56 |
19 | Normalizing a large number of quantitative traits using empirical normal quantile transformation | BMC Proceedings | 2007 | 55 |
20 | Probing genetic control of swine responses to PRRSV infection: current progress of the PRRS host genetics consortium | BMC Proceedings | 2011 | 55 |
21 | Gene drives in our future: challenges of and opportunities for using a self-sustaining technology in pest and vector management | BMC Proceedings | 2018 | 51 |
22 | Data for Genetic Analysis Workshop 16 Problem 1, association analysis of rheumatoid arthritis data | BMC Proceedings | 2009 | 48 |
23 | Classification models for clear cell renal carcinoma stage progression, based on tumor RNAseq expression trained supervised machine learning algorithms | BMC Proceedings | 2014 | 47 |
24 | Comparing gene set analysis methods on single-nucleotide polymorphism data from Genetic Analysis Workshop 16 | BMC Proceedings | 2009 | 45 |
25 | Genomic breeding value prediction and QTL mapping of QTLMAS2010 data using Bayesian Methods | BMC Proceedings | 2011 | 45 |
26 | MetaPath: identifying differentially abundant metabolic pathways in metagenomic datasets | BMC Proceedings | 2011 | 44 |
27 | Genome-wide sparse canonical correlation of gene expression with genotypes | BMC Proceedings | 2007 | 43 |
28 | Composition and biological significance of the human Nα-terminal acetyltransferases | BMC Proceedings | 2009 | 43 |
29 | Drought stress and changes in the lignin content and composition in Eucalyptus | BMC Proceedings | 2011 | 43 |
30 | Wide awake local anaesthesia no tourniquet technique (WALANT) | BMC Proceedings | 2015 | 43 |
31 | The vitamin D paradox in Black Americans: a systems-based approach to investigating clinical practice, research, and public health - expert panel meeting report | BMC Proceedings | 2018 | 42 |
32 | Prognoses for diagnoses: medical search online and “cyberchondria” | BMC Proceedings | 2012 | 39 |
33 | Highly precise protein-protein interaction prediction based on consensus between template-based and de novo docking methods | BMC Proceedings | 2013 | 37 |
34 | Regularized group regression methods for genomic prediction: Bridge, MCP, SCAD, group bridge, group lasso, sparse group lasso, group MCP and group SCAD | BMC Proceedings | 2014 | 37 |
35 | Challenges in the implementation of an electronic surveillance system in a resource-limited setting: Alerta, in Peru | BMC Proceedings | 2008 | 36 |
36 | Combining least absolute shrinkage and selection operator (LASSO) and principal-components analysis for detection of gene-gene interactions in genome-wide association studies | BMC Proceedings | 2009 | 36 |
37 | Pathway results from the chicken data set using GOTM, Pathway Studio and Ingenuity softwares | BMC Proceedings | 2009 | 35 |
38 | sigReannot: an oligo-set re-annotation pipeline based on similarities with the Ensembl transcripts and Unigene clusters | BMC Proceedings | 2009 | 33 |
39 | Sensitivity of genomic selection to using different prior distributions | BMC Proceedings | 2010 | 33 |
40 | Towards inclusive social appraisal: risk, participation and democracy in governance of synthetic biology | BMC Proceedings | 2018 | 33 |
41 | Data for Genetic Analysis Workshop (GAW) 15 Problem 2, genetic causes of rheumatoid arthritis and associated traits | BMC Proceedings | 2007 | 32 |
42 | Towards structured output prediction of enzyme function | BMC Proceedings | 2008 | 32 |
43 | Study of a recombinant CHO cell line producing a monoclonal antibody by ATF or TFF external filter perfusion in a WAVE Bioreactor™ | BMC Proceedings | 2011 | 32 |
44 | Genetic Analysis Workshop 15: simulation of a complex genetic model for rheumatoid arthritis in nuclear families including a dense SNP map with linkage disequilibrium between marker loci and trait loci | BMC Proceedings | 2007 | 31 |
45 | Detecting disease-causing genes by LASSO-Patternsearch algorithm | BMC Proceedings | 2007 | 31 |
46 | Emerging roles of chicken and viral microRNAs in avian disease | BMC Proceedings | 2011 | 31 |
47 | PREST-plus identifies pedigree errors and cryptic relatedness in the GAW18 sample using genome-wide SNP data | BMC Proceedings | 2014 | 31 |
48 | Identification of genes and haplotypes that predict rheumatoid arthritis using random forests | BMC Proceedings | 2009 | 30 |
49 | Methods for interpreting lists of affected genes obtained in a DNA microarray experiment | BMC Proceedings | 2009 | 29 |
50 | Assessment of genotype imputation methods | BMC Proceedings | 2009 | 29 |