| # | Title | Journal | Year | Citations |
|---|
| 1 | Development of an extensive set of 16S rDNA-targeted primers for quantification of pathogenic and indigenous bacteria in faecal samples by real-time PCR | Journal of Applied Microbiology | 2004 | 878 |
| 2 | Analysis of the Fecal Microbiota of Irritable Bowel Syndrome Patients and Healthy Controls with Real-Time PCR | American Journal of Gastroenterology | 2005 | 608 |
| 3 | Proteolytic systems of lactic acid bacteria | Applied Microbiology and Biotechnology | 2006 | 530 |
| 4 | Hantavirus Infections in Europe | Lancet Infectious Diseases, The | 2003 | 527 |
| 5 | Indicators of inflammation in the diagnosis of mastitis | Veterinary Research | 2003 | 342 |
| 6 | Pili-like proteins of Akkermansia muciniphila modulate host immune responses and gut barrier function | PLoS ONE | 2017 | 340 |
| 7 | Bovine Mastitis in Finland 2001—Prevalence, Distribution of Bacteria, and Antimicrobial Resistance | Journal of Dairy Science | 2004 | 329 |
| 8 | The Genome of Akkermansia muciniphila, a Dedicated Intestinal Mucin Degrader, and Its Use in Exploring Intestinal Metagenomes | PLoS ONE | 2011 | 328 |
| 9 | A global map of human gene expression | Nature Biotechnology | 2010 | 315 |
| 10 | Coagulase-negative staphylococci—Emerging mastitis pathogens | Veterinary Microbiology | 2009 | 304 |
| 11 | Comparison of real-time PCR with SYBR Green I or 5'-nuclease assays and dot-blot hybridization with rDNA-targeted oligonucleotide probes in quantification of selected faecal bacteria | Microbiology (United Kingdom) | 2003 | 262 |
| 12 | Composition and temporal stability of gastrointestinal microbiota in irritable bowel syndrome â a longitudinal study in IBS and control subjects | FEMS Immunology and Medical Microbiology | 2005 | 262 |
| 13 | Sources of Listeria monocytogenes Contamination in a Cold-Smoked Rainbow Trout Processing Plant Detected by Pulsed-Field Gel Electrophoresis Typing | Applied and Environmental Microbiology | 1999 | 258 |
| 14 | Microbial community analysis reveals high level phylogenetic alterations in the overall gastrointestinal microbiota of diarrhoea-predominant irritable bowel syndrome sufferers | BMC Gastroenterology | 2009 | 252 |
| 15 | Hantavirus infections in Europe and their impact on public health | Reviews in Medical Virology | 2013 | 252 |
| 16 | Campylobacter spp. , Giardia spp. , Cryptosporidium spp., Noroviruses, and Indicator Organisms in Surface Water in Southwestern Finland, 2000-2001 | Applied and Environmental Microbiology | 2004 | 241 |
| 17 | Genome-Wide Analysis Reveals Selection for Important Traits in Domestic Horse Breeds | PLoS Genetics | 2013 | 240 |
| 18 | Review: Capripoxvirus Diseases: Current Status and Opportunities for Control | Transboundary and Emerging Diseases | 2017 | 235 |
| 19 | Historical Perspectives and Guidelines for Botulinum Neurotoxin Subtype Nomenclature | Toxins | 2017 | 232 |
| 20 | Prolonged survival of Puumala hantavirus outside the host: evidence for indirect transmission via the environment | Journal of General Virology | 2006 | 227 |
| 21 | Clinical effects and pharmacokinetics of medetomidine and its enantiomers in dogs | Journal of Veterinary Pharmacology and Therapeutics | 2000 | 225 |
| 22 | Persistent Listeria monocytogenes Strains Show Enhanced Adherence to Food Contact Surface after Short Contact Times | Journal of Food Protection | 2000 | 222 |
| 23 | Cold Shock Proteins: A Minireview with Special Emphasis on Csp-family of Enteropathogenic Yersinia | Frontiers in Microbiology | 2016 | 216 |
| 24 | Genetic Diversity in the Modern Horse Illustrated from Genome-Wide SNP Data | PLoS ONE | 2013 | 214 |
| 25 | Review on methicillin-resistant Staphylococcus pseudintermedius | Journal of Antimicrobial Chemotherapy | 2011 | 213 |
| 26 | Collagenase-2 (MMP-8) and collagenase-3 (MMP-13) in adult periodontitis: molecular forms and levels in gingival crevicular fluid and immunolocalisation in gingival tissue | Journal of Clinical Periodontology | 2002 | 208 |
| 27 | An Outbreak ofListeria MonocytogenesSerotype 3a Infections from Butter in Finland | Journal of Infectious Diseases | 2000 | 206 |
| 28 | chewBBACA: A complete suite for gene-by-gene schema creation and strain identification | Microbial Genomics | 2018 | 201 |
| 29 | Public health risk of antimicrobial resistance transfer from companion animals | Journal of Antimicrobial Chemotherapy | 2017 | 198 |
| 30 | Association of symptoms with gastrointestinal microbiota in irritable bowel syndrome | World Journal of Gastroenterology | 2010 | 195 |
| 31 | Environmental and sow-related factors affecting the duration of farrowing | Animal Reproduction Science | 2010 | 189 |
| 32 | Coagulase-negative staphylococci as cause of bovine mastitis—Not so different from Staphylococcus aureus? | Veterinary Microbiology | 2009 | 183 |
| 33 | Clinical characteristics and persistence of bovine mastitis caused by different species of coagulase-negative staphylococci identified with API or AFLP | Veterinary Microbiology | 2006 | 179 |
| 34 | MMP Inhibition and Downregulation by Bisphosphonates | Annals of the New York Academy of Sciences | 1999 | 178 |
| 35 | Tracing enteric viruses in the European berry fruit supply chain | International Journal of Food Microbiology | 2013 | 175 |
| 36 | Psychometric testing of the Helsinki chronic pain index by completion of a questionnaire in Finnish by owners of dogs with chronic signs of pain caused by osteoarthritis | American Journal of Veterinary Research | 2009 | 173 |
| 37 | Novel insights into the epidemiology of Clostridium perfringens type A food poisoning | Food Microbiology | 2011 | 173 |
| 38 | Glycobiome: Bacteria and mucus at the epithelial interface | Bailliere's Best Practice and Research in Clinical Gastroenterology | 2013 | 171 |
| 39 | Norovirus Outbreaks from Drinking Water | Emerging Infectious Diseases | 2005 | 167 |
| 40 | Adaptive and cross-adaptive responses of persistent and non-persistent Listeria monocytogenes strains to disinfectants | International Journal of Food Microbiology | 2003 | 164 |
| 41 | A Widespread Outbreak ofYersinia pseudotuberculosisO:3 Infection from Iceberg Lettuce | Journal of Infectious Diseases | 2004 | 164 |
| 42 | Probiotic supplementation restores normal microbiota composition and function in antibiotic-treated and in caesarean-born infants | Microbiome | 2018 | 160 |
| 43 | Diarrhoea-predominant irritable bowel syndromedistinguishable by 16S rRNA gene phylotype quantifcation | World Journal of Gastroenterology | 2009 | 157 |
| 44 | Parallel independent evolution of pathogenicity within the genus Yersinia | Proceedings of the National Academy of Sciences of the United States of America | 2014 | 154 |
| 45 | Multiplex PCR Assay for Detection and Identification of Clostridium botulinum Types A, B, E, and F in Food and Fecal Material | Applied and Environmental Microbiology | 2001 | 153 |
| 46 | Minimizing errors in RT-PCR detection and quantification of SARS-CoV-2 RNA for wastewater surveillance | Science of the Total Environment | 2022 | 153 |
| 47 | Culture and Characteristics of Helicobacter bizzozeronii, a New Canine Gastric Helicobacter sp. | International Journal of Systematic Bacteriology | 1996 | 152 |
| 48 | Effect of the environment on the physiology of the sow during late pregnancy, farrowing and early lactation | Animal Reproduction Science | 2008 | 152 |
| 49 | Persistent and Nonpersistent Listeria monocytogenes Contamination in Meat and Poultry Processing Plants | Journal of Food Protection | 2003 | 151 |
| 50 | Transfer of Persistent Listeria monocytogenes Contamination between Food-Processing Plants Associated with a Dicing Machine | Journal of Food Protection | 2002 | 143 |
