limma powers differential expression analyses for RNA-sequencing and microarray studies | Nucleic Acids Research | 2015 | 13.4K |
Standards and guidelines for the interpretation of sequence variants: a joint consensus recommendation of the American College of Medical Genetics and Genomics and the Association for Molecular Pathology | Genetics in Medicine | 2015 | 12K |
IQ-TREE: a fast and effective stochastic algorithm for estimating maximum-likelihood phylogenies | Molecular Biology and Evolution | 2015 | 8.1K |
STRING v10: protein-protein interaction networks, integrated over the tree of life | Nucleic Acids Research | 2015 | 6.3K |
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes | Genome Research | 2015 | 3.4K |
UniProt: a hub for protein information | Nucleic Acids Research | 2015 | 3.4K |
CDD: NCBI's conserved domain database | Nucleic Acids Research | 2015 | 2.1K |
LD Score regression distinguishes confounding from polygenicity in genome-wide association studies | Nature Genetics | 2015 | 2.1K |
MetaboAnalyst 3.0--making metabolomics more meaningful | Nucleic Acids Research | 2015 | 2.1K |
Gene Ontology Consortium: going forward | Nucleic Acids Research | 2015 | 2K |
An atlas of genetic correlations across human diseases and traits | Nature Genetics | 2015 | 1.8K |
Coronaviruses: an overview of their replication and pathogenesis | Methods in Molecular Biology | 2015 | 1.8K |
COSMIC: exploring the world's knowledge of somatic mutations in human cancer | Nucleic Acids Research | 2015 | 1.8K |
The landscape of long noncoding RNAs in the human transcriptome | Nature Genetics | 2015 | 1.8K |
OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy | Genome Biology | 2015 | 1.6K |
PhosphoSitePlus, 2014: mutations, PTMs and recalibrations | Nucleic Acids Research | 2015 | 1.6K |
Clumpak: a program for identifying clustering modes and packaging population structure inferences across K | Molecular Ecology Resources | 2015 | 1.5K |
ClustVis: a web tool for visualizing clustering of multivariate data using Principal Component Analysis and heatmap | Nucleic Acids Research | 2015 | 1.5K |
The IPD and IMGT/HLA database: allele variant databases | Nucleic Acids Research | 2015 | 1.4K |
antiSMASH 3.0-a comprehensive resource for the genome mining of biosynthetic gene clusters | Nucleic Acids Research | 2015 | 1.4K |
A comprehensive 1,000 Genomes-based genome-wide association meta-analysis of coronary artery disease | Nature Genetics | 2015 | 1.3K |
Association analyses identify 38 susceptibility loci for inflammatory bowel disease and highlight shared genetic risk across populations | Nature Genetics | 2015 | 1.3K |
miRDB: an online resource for microRNA target prediction and functional annotations | Nucleic Acids Research | 2015 | 1.3K |
Repbase Update, a database of repetitive elements in eukaryotic genomes | Mobile DNA | 2015 | 1.2K |
Machine learning applications in cancer prognosis and prediction | Computational and Structural Biotechnology Journal | 2015 | 1.2K |